[1]Case-control / biochemical1988
Kang SS, et al. Metabolism, 37:611-613 (1988)
Kang SS, et al. Metabolism. 1988;37:611-613. PMID: 3386531.
Original source ↗ · doi:10.1016/0026-0495(88)90076-5 · PMID 3386531
- What it supports
- The thermolabile-MTHFR discovery: heat-treating lymphocyte extracts at 46 °C for five minutes left controls with 37.6% ± 5.6% of MTHFR activity, but 6 of 21 young coronary-artery-disease patients retained only 13.6% ± 5.1% — a heat-sensitive enzyme, running in families and, apparently, in arteries.
- What it does not show
- A biochemical phenotype in lymphocyte extracts from a small case series; the underlying genotype was still seven years away.
[2]Family / genetic1991
Kang SS, et al. Am J Hum Genet, 48:536-545 (1991)
Kang SS, et al. Am J Hum Genet. 1991;48:536-545. PMID: 1998339.
Original source ↗ · PMID 1998339
- What it supports
- Extended the 1988 observation into inheritance: thermolabile MTHFR runs in families — the trait was heritable before anyone knew its molecular basis.
- What it does not show
- Pre-molecular genetics: the variant behind the trait had not yet been identified.
[3]Case-control1993
Kang SS, et al. Circulation, 88:1463-1469 (1993)
Kang SS, et al. Circulation. 1993;88:1463-1469. PMID: 8403293.
Original source ↗ · doi:10.1161/01.cir.88.4.1463 · PMID 8403293
- What it supports
- Further case-control extension of the thermolabile-MTHFR coronary story — the body of association evidence that made solving the variant urgent.
- What it does not show
- Association-level evidence in selected clinical samples; mechanism still unknown at the time.
[4]Case-control / biochemical1995
Frosst P, et al. Nat Genet, 10:111-113 (1995)
Frosst P, et al. Nat Genet. 1995;10:111-113. PMID: 7647779.
Original source ↗ · doi:10.1038/ng0595-111 · PMID 7647779
- What it supports
- Pinned the thermolabile ghost to a single base: 677C→T (Ala222Val), present on about 38% of unselected chromosomes — one of the most common “disease” variants ever described. Homozygotes show elevated homocysteine; it is the strongest common genetic cause of mild hyperhomocysteinemia. The same paper defines the MTHFR product as the predominant circulatory form of folate and the carbon donor for homocysteine remethylation.
- What it does not show
- About C677T, not A1298C — the second common variant was discovered three years later.
[5]Case-control / biochemical1998
A second common mutation in the MTHFR gene: an additional risk factor for neural-tube defects?
van der Put NMJ, et al. Am J Hum Genet. 1998;62:1044-1051. PMID: 9545395.
Original source ↗ · doi:10.1086/301825 · PMID 9545395
- What it supports
- The A1298C discovery paper: 1298C allele frequency 0.33 in a Dutch sample; lymphocyte MTHFR activity decreased, most pronounced in homozygotes (ANOVA P<.0001). Neither 1298CC nor 1298AC was associated with higher homocysteine or lower folate. Compound heterozygotes (677CT/1298AC) showed the C677T-homozygote-like phenotype — reduced specific activity (P<.0001), higher homocysteine and decreased plasma folate (P<.03) — with an NTD odds ratio of 2.04 whose 95% CI of 0.9–4.7 crosses 1.
- What it does not show
- A1298C alone did not raise NTD risk, and the compound-heterozygosity signal was not statistically significant; the authors framed it as an additional genetic risk factor while the interval admitted no effect.
[6]Biochemical / cohort1998
Weisberg I, et al. Mol Genet Metab, 64:169-172 (1998)
Weisberg I, et al. Mol Genet Metab. 1998;64:169-172. PMID: 9719624.
Original source ↗ · doi:10.1006/mgme.1998.2714 · PMID 9719624
- What it supports
- The independent discovery of A1298C: 1298CC homozygotes carried about 60% of control enzyme activity and about 10% of Canadian individuals were 1298CC; about 15% were compound heterozygotes (677T + 1298C) with 50–60% of control activity — lower than single C677T heterozygotes. No individual homozygous for both variants was observed.
- What it does not show
- A Canadian sample with biochemical phenotyping; genotype frequencies vary by ancestry.
[7]In-vitro + cohort2001
Weisberg IS, et al. Atherosclerosis, 156:409-415 (2001)
Weisberg IS, et al. Atherosclerosis. 2001;156:409-415. PMID: 11395038.
Original source ↗ · doi:10.1016/s0021-9150(00)00671-7 · PMID 11395038
- What it supports
- Recombinant expression separated the two variants: the 1298 mutant retained 68% ± 5.0 of wild-type activity (against 45% ± 10.8 for the 677 mutant) and was not thermolabile. In the Family Heart Study, the 1298 mutation alone did not raise homocysteine; only double heterozygotes showed significantly higher fasting homocysteine (P<0.05).
- What it does not show
- Heterologous expression measures the protein outside its cellular context; the in-vivo mechanism of the mild cellular effect is less clear than for C677T.
[8]In-vitro2001
Yamada K, et al. PNAS, 98:14853-14858 (2001)
Yamada K, et al. Proc Natl Acad Sci USA. 2001;98:14853-14858. PMID: 11742092.
Original source ↗ · doi:10.1073/pnas.261469998 · PMID 11742092
- What it supports
- The famous caveat: highly purified recombinant human Glu429Ala MTHFR was “indistinguishable from the wild-type enzyme” in biochemical properties — the cellular activity reduction measured in lymphocyte extracts does not survive purification. The same work established C677T’s mechanism: accelerated FAD cofactor loss, slowed by folate and SAM binding.
- What it does not show
- Purified-protein biochemistry removes the cellular environment; a normal purified enzyme and a real cellular phenotype can both be true.
[9]In-vitro / structure1999
Guenther BD, et al. Nat Struct Biol, 6:359-365 (1999)
Guenther BD, et al. Nat Struct Biol. 1999;6:359-365. PMID: 10201405.
Original source ↗ · doi:10.1038/7594 · PMID 10201405
- What it supports
- The domain architecture: MTHFR carries a C-terminal regulatory domain that binds SAM, the enzyme’s allosteric inhibitor — the domain in which A1298C (Glu429Ala) sits, distinct from the N-terminal catalytic domain that carries C677T (Ala222Val).
- What it does not show
- Structural and in-vitro work; it establishes architecture, not clinical effect.
[10]In-vitro / structure2006
Pejchal R, et al. Biochemistry, 45:4808-4818 (2006)
Pejchal R, et al. Biochemistry. 2006;45:4808-4818. PMID: 16605249.
Original source ↗ · doi:10.1021/bi052294c · PMID 16605249
- What it supports
- The C677T mechanism in structural detail: the Ala222Val substitution accelerates FAD cofactor loss and monomer dissociation, producing the thermolabile enzyme — why C677T is the stronger of the two common variants.
- What it does not show
- The FAD-loss mechanism is established for C677T, not for A1298C; the 1298 variant shows no thermolability and no FAD-loss behaviour.
[11]Cohort (n=10,601)2007
Fredriksen A, et al. Hum Mutat, 28:856-865 (2007)
Fredriksen A, et al. Hum Mutat. 2007;28:856-865. PMID: 17436311.
Original source ↗ · doi:10.1002/humu.20522 · PMID 17436311
- What it supports
- The nomenclature and the nuance: anchors the modern name c.1286A>C (known as 1298A>C; p.Glu429Ala), and in the largest dataset (10,601 Norwegians) c.1286A>C did show statistically significant (P<0.01) associations with homocysteine, folate and betaine — far weaker than c.665C>T’s strong associations.
- What it does not show
- A Norwegian cohort; the A1298C-alone signals are weak and sit in the shadow of C677T and of vitamin status.
[12]Case report2001
Tonetti C, et al. J Inherit Metab Dis (2001)
Tonetti C, et al. J Inherit Metab Dis. 2001. PMID: 11916316.
Original source ↗ · doi:10.1023/a:1013988123902 · PMID 11916316
- What it supports
- The exon-mapping anchor: published MTHFR case literature places “the polymorphism 1298A>C on exon 7… 677C>T on exon 4”, consistent with Ensembl VEP transcript mapping for rs1801131.
- What it does not show
- Case literature cited for exon mapping; volume and pages were not captured in the 2026-08-09 verification pass.
[13]Case report2011
Prasad AN, et al. Brain Dev (2011)
Prasad AN, et al. Brain Dev. 2011. PMID: 21778025.
Original source ↗ · doi:10.1016/j.braindev.2011.05.014 · PMID 21778025
- What it supports
- Context for the far end of the same gene: severe MTHFR deficiency (a rare recessive disorder) and epilepsy — a reminder that the common polymorphisms discussed on this site are not the severe-deficiency state.
- What it does not show
- A case report about severe MTHFR deficiency, not about the common A1298C or C677T variants.